A C D E F G J M P R S T U W 
All Classes All Packages

A

AcquisitionRunNanopore - Class in ca.bccdcphl.sequencingruns.model
 
AcquisitionRunNanopore() - Constructor for class ca.bccdcphl.sequencingruns.model.AcquisitionRunNanopore
 
AcquisitionRunNanoporeDTO - Class in ca.bccdcphl.sequencingruns.dto
 
AcquisitionRunNanoporeDTO() - Constructor for class ca.bccdcphl.sequencingruns.dto.AcquisitionRunNanoporeDTO
 
Application - Class in ca.bccdcphl.sequencingruns
 
Application() - Constructor for class ca.bccdcphl.sequencingruns.Application
 
AuthFilter - Class in ca.bccdcphl.sequencingruns.security
 
AuthFilter() - Constructor for class ca.bccdcphl.sequencingruns.security.AuthFilter
 

C

ca.bccdcphl.sequencingruns - package ca.bccdcphl.sequencingruns
 
ca.bccdcphl.sequencingruns.assembler - package ca.bccdcphl.sequencingruns.assembler
 
ca.bccdcphl.sequencingruns.config.api - package ca.bccdcphl.sequencingruns.config.api
 
ca.bccdcphl.sequencingruns.config.application - package ca.bccdcphl.sequencingruns.config.application
 
ca.bccdcphl.sequencingruns.config.datasource - package ca.bccdcphl.sequencingruns.config.datasource
 
ca.bccdcphl.sequencingruns.controller - package ca.bccdcphl.sequencingruns.controller
 
ca.bccdcphl.sequencingruns.dto - package ca.bccdcphl.sequencingruns.dto
 
ca.bccdcphl.sequencingruns.model - package ca.bccdcphl.sequencingruns.model
 
ca.bccdcphl.sequencingruns.model.aggregates - package ca.bccdcphl.sequencingruns.model.aggregates
 
ca.bccdcphl.sequencingruns.repositories - package ca.bccdcphl.sequencingruns.repositories
 
ca.bccdcphl.sequencingruns.security - package ca.bccdcphl.sequencingruns.security
 
ca.bccdcphl.sequencingruns.service - package ca.bccdcphl.sequencingruns.service
 
configureRepositoryRestConfiguration(RepositoryRestConfiguration, CorsRegistry) - Method in class ca.bccdcphl.sequencingruns.config.api.RestApiConfig
 
count() - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingInstrumentIlluminaRepository
 
count() - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingInstrumentNanoporeRepository
 
count() - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingRunIlluminaRepository
 
count() - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingRunNanoporeRepository
 
createInstrument(String, String, String) - Method in class ca.bccdcphl.sequencingruns.service.SequencingInstrumentIlluminaService
 
createInstrument(String, String, String) - Method in class ca.bccdcphl.sequencingruns.service.SequencingInstrumentNanoporeService
 
createNullSequencingRun(String) - Method in class ca.bccdcphl.sequencingruns.service.SequencingRunIlluminaService
 
createNullSequencingRun(String) - Method in class ca.bccdcphl.sequencingruns.service.SequencingRunNanoporeService
 
createSequencingRun(SequencingRunIlluminaDTO) - Method in class ca.bccdcphl.sequencingruns.service.SequencingRunIlluminaService
 
createSequencingRun(SequencingRunNanoporeDTO) - Method in class ca.bccdcphl.sequencingruns.service.SequencingRunNanoporeService
 

D

DataSourceConfig - Class in ca.bccdcphl.sequencingruns.config.datasource
 
DataSourceConfig() - Constructor for class ca.bccdcphl.sequencingruns.config.datasource.DataSourceConfig
 
DefaultApplicationConfig - Class in ca.bccdcphl.sequencingruns.config.application
 
DefaultApplicationConfig() - Constructor for class ca.bccdcphl.sequencingruns.config.application.DefaultApplicationConfig
 
delete(SequencingInstrumentIllumina) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingInstrumentIlluminaRepository
 
delete(SequencingInstrumentNanopore) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingInstrumentNanoporeRepository
 
delete(SequencingRunIllumina) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingRunIlluminaRepository
 
delete(SequencingRunNanopore) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingRunNanoporeRepository
 
deleteAll() - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingInstrumentIlluminaRepository
 
deleteAll() - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingInstrumentNanoporeRepository
 
deleteAll() - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingRunIlluminaRepository
 
deleteAll() - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingRunNanoporeRepository
 
deleteAll(Iterable<? extends SequencingInstrumentIllumina>) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingInstrumentIlluminaRepository
 
deleteAll(Iterable<? extends SequencingInstrumentNanopore>) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingInstrumentNanoporeRepository
 
deleteAll(Iterable<? extends SequencingRunIllumina>) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingRunIlluminaRepository
 
deleteAll(Iterable<? extends SequencingRunNanopore>) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingRunNanoporeRepository
 
deleteAllById(Iterable<? extends Long>) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingRunIlluminaRepository
 
deleteAllById(Iterable<? extends Long>) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingInstrumentIlluminaRepository
 
deleteAllById(Iterable<? extends Long>) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingInstrumentNanoporeRepository
 
deleteAllById(Iterable<? extends Long>) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingRunNanoporeRepository
 
deleteById(Long) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingInstrumentIlluminaRepository
 
deleteById(Long) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingRunIlluminaRepository
 
deleteById(Long) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingRunNanoporeRepository
 
deleteByInstrumentId(String) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingInstrumentIlluminaRepository
 
deleteByInstrumentId(String) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingInstrumentNanoporeRepository
 
deleteBySequencingRunId(String) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingRunIlluminaRepository
 
DevApplicationConfig - Class in ca.bccdcphl.sequencingruns.config.application
 
DevApplicationConfig() - Constructor for class ca.bccdcphl.sequencingruns.config.application.DevApplicationConfig
 
doFilterInternal(HttpServletRequest, HttpServletResponse, FilterChain) - Method in class ca.bccdcphl.sequencingruns.security.AuthFilter
 

E

existsById(Long) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingInstrumentIlluminaRepository
 
existsById(Long) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingRunIlluminaRepository
 
existsById(Long) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingRunNanoporeRepository
 

F

filterChain(HttpSecurity) - Method in class ca.bccdcphl.sequencingruns.config.api.SecurityConfig
 
findAll() - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingInstrumentIlluminaRepository
 
findAll() - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingInstrumentNanoporeRepository
 
findAll() - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingRunIlluminaRepository
 
findAll() - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingRunNanoporeRepository
 
findAllById(Iterable<Long>) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingInstrumentIlluminaRepository
 
findAllById(Iterable<Long>) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingInstrumentNanoporeRepository
 
findAllById(Iterable<Long>) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingRunIlluminaRepository
 
findAllById(Iterable<Long>) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingRunNanoporeRepository
 
findAllByInstrumentId(String) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingRunIlluminaRepository
 
findAllByInstrumentId(String) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingRunNanoporeRepository
 
findById(Long) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingInstrumentIlluminaRepository
 
findById(Long) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingInstrumentNanoporeRepository
 
findById(Long) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingRunIlluminaRepository
 
findById(Long) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingRunNanoporeRepository
 
findByInstrumentId(String) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingInstrumentIlluminaRepository
 
findByInstrumentId(String) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingInstrumentNanoporeRepository
 
findBySequencingRunId(String) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingRunIlluminaRepository
 
findBySequencingRunId(String) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingRunNanoporeRepository
 
findDemultiplexingBySequencingRunIdAndDemultiplexingId(String, String) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingRunIlluminaRepository
 
findDemultiplexingBySequencingRunIdAndDemultiplexingId(String, String) - Method in class ca.bccdcphl.sequencingruns.repositories.SequencingRunIlluminaRepositoryImpl
 
findDemultiplexingsBySequencingRunId(String) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingRunIlluminaRepository
 
findDemultiplexingsBySequencingRunId(String) - Method in class ca.bccdcphl.sequencingruns.repositories.SequencingRunIlluminaRepositoryImpl
 

G

getIlluminaInstrumentById(String) - Method in class ca.bccdcphl.sequencingruns.controller.SequencingInstrumentsController
 
getIlluminaInstruments() - Method in class ca.bccdcphl.sequencingruns.controller.SequencingInstrumentsController
 
getIlluminaInstrumentStatus(String) - Method in class ca.bccdcphl.sequencingruns.controller.SequencingInstrumentsController
 
getIlluminaSequencingRunById(String) - Method in class ca.bccdcphl.sequencingruns.controller.SequencingRunsController
 
getIlluminaSequencingRunDemultiplexingBySequencingRunIdAndDemultiplexingId(String, String) - Method in class ca.bccdcphl.sequencingruns.controller.SequencingRunsController
 
getIlluminaSequencingRunDemultiplexingsBySequencingRunId(String) - Method in class ca.bccdcphl.sequencingruns.controller.SequencingRunsController
 
getIlluminaSequencingRuns() - Method in class ca.bccdcphl.sequencingruns.controller.SequencingRunsController
 
getIlluminaSequencingRunsByInstrumentId(String) - Method in class ca.bccdcphl.sequencingruns.controller.SequencingInstrumentsController
 
getInstrumentById(String) - Method in class ca.bccdcphl.sequencingruns.service.SequencingInstrumentIlluminaService
 
getInstrumentById(String) - Method in class ca.bccdcphl.sequencingruns.service.SequencingInstrumentNanoporeService
 
getInstruments() - Method in class ca.bccdcphl.sequencingruns.controller.SequencingInstrumentsController
 
getInstruments() - Method in class ca.bccdcphl.sequencingruns.controller.SequencingRunsController
 
getInstruments() - Method in class ca.bccdcphl.sequencingruns.service.SequencingInstrumentIlluminaService
 
getInstruments() - Method in class ca.bccdcphl.sequencingruns.service.SequencingInstrumentNanoporeService
 
getNanoporeInstrumentById(String) - Method in class ca.bccdcphl.sequencingruns.controller.SequencingInstrumentsController
 
getNanoporeInstruments() - Method in class ca.bccdcphl.sequencingruns.controller.SequencingInstrumentsController
 
getNanoporeInstrumentStatus(String) - Method in class ca.bccdcphl.sequencingruns.controller.SequencingInstrumentsController
 
getNanoporeSequencingRunById(String) - Method in class ca.bccdcphl.sequencingruns.controller.SequencingRunsController
 
getNanoporeSequencingRuns() - Method in class ca.bccdcphl.sequencingruns.controller.SequencingRunsController
 
getNanoporeSequencingRunsByInstrumentId(String) - Method in class ca.bccdcphl.sequencingruns.controller.SequencingInstrumentsController
 
getRoot() - Method in class ca.bccdcphl.sequencingruns.controller.RootController
 
getSequencingRunById(String) - Method in class ca.bccdcphl.sequencingruns.service.SequencingRunIlluminaService
 
getSequencingRunById(String) - Method in class ca.bccdcphl.sequencingruns.service.SequencingRunNanoporeService
 
getSequencingRunDemultiplexingBySequencingRunIdAndDemultiplexingId(String, String) - Method in class ca.bccdcphl.sequencingruns.service.SequencingRunIlluminaService
 
getSequencingRunDemultiplexingsBySequencingRunId(String) - Method in class ca.bccdcphl.sequencingruns.service.SequencingRunIlluminaService
 
getSequencingRuns() - Method in class ca.bccdcphl.sequencingruns.service.SequencingRunIlluminaService
 
getSequencingRuns() - Method in class ca.bccdcphl.sequencingruns.service.SequencingRunNanoporeService
 
getSequencingRunsByInstrumentId(String) - Method in class ca.bccdcphl.sequencingruns.service.SequencingRunIlluminaService
 
getSequencingRunsByInstrumentId(String) - Method in class ca.bccdcphl.sequencingruns.service.SequencingRunNanoporeService
 

J

JsonApiConfig - Class in ca.bccdcphl.sequencingruns.config.api
 
JsonApiConfig() - Constructor for class ca.bccdcphl.sequencingruns.config.api.JsonApiConfig
 

M

main(String[]) - Static method in class ca.bccdcphl.sequencingruns.Application
 

P

postIlluminaInstrumentStatus(String, SequencingInstrumentStatusUpdateDTO) - Method in class ca.bccdcphl.sequencingruns.controller.SequencingInstrumentsController
 
postIlluminaSequencingRun(SequencingRunIlluminaDTO) - Method in class ca.bccdcphl.sequencingruns.controller.SequencingRunsController
 
postNanoporeInstrumentStatus(String, SequencingInstrumentStatusUpdateDTO) - Method in class ca.bccdcphl.sequencingruns.controller.SequencingInstrumentsController
 

R

RestApiConfig - Class in ca.bccdcphl.sequencingruns.config.api
 
RestApiConfig() - Constructor for class ca.bccdcphl.sequencingruns.config.api.RestApiConfig
 
RootController - Class in ca.bccdcphl.sequencingruns.controller
API Root controller, serves responses for requests to '/'
RootController() - Constructor for class ca.bccdcphl.sequencingruns.controller.RootController
 

S

save(S) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingInstrumentIlluminaRepository
 
save(S) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingInstrumentNanoporeRepository
 
save(S) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingRunIlluminaRepository
 
save(S) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingRunNanoporeRepository
 
saveAll(Iterable<S>) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingInstrumentIlluminaRepository
 
saveAll(Iterable<S>) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingInstrumentNanoporeRepository
 
saveAll(Iterable<S>) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingRunIlluminaRepository
 
saveAll(Iterable<S>) - Method in interface ca.bccdcphl.sequencingruns.repositories.SequencingRunNanoporeRepository
 
SecurityConfig - Class in ca.bccdcphl.sequencingruns.config.api
 
SecurityConfig() - Constructor for class ca.bccdcphl.sequencingruns.config.api.SecurityConfig
 
SequencedLibraryIllumina - Class in ca.bccdcphl.sequencingruns.model
 
SequencedLibraryIllumina() - Constructor for class ca.bccdcphl.sequencingruns.model.SequencedLibraryIllumina
 
SequencedLibraryIlluminaDTO - Class in ca.bccdcphl.sequencingruns.dto
 
SequencedLibraryIlluminaDTO() - Constructor for class ca.bccdcphl.sequencingruns.dto.SequencedLibraryIlluminaDTO
 
SequencedLibraryNanopore - Class in ca.bccdcphl.sequencingruns.model
 
SequencedLibraryNanopore() - Constructor for class ca.bccdcphl.sequencingruns.model.SequencedLibraryNanopore
 
SequencedLibraryNanoporeDTO - Class in ca.bccdcphl.sequencingruns.dto
 
SequencedLibraryNanoporeDTO() - Constructor for class ca.bccdcphl.sequencingruns.dto.SequencedLibraryNanoporeDTO
 
SequencingInstrumentIllumina - Class in ca.bccdcphl.sequencingruns.model.aggregates
 
SequencingInstrumentIllumina(String, String, String) - Constructor for class ca.bccdcphl.sequencingruns.model.aggregates.SequencingInstrumentIllumina
 
SequencingInstrumentIlluminaAssembler - Class in ca.bccdcphl.sequencingruns.assembler
 
SequencingInstrumentIlluminaAssembler() - Constructor for class ca.bccdcphl.sequencingruns.assembler.SequencingInstrumentIlluminaAssembler
 
SequencingInstrumentIlluminaDTO - Class in ca.bccdcphl.sequencingruns.dto
 
SequencingInstrumentIlluminaDTO() - Constructor for class ca.bccdcphl.sequencingruns.dto.SequencingInstrumentIlluminaDTO
 
SequencingInstrumentIlluminaRepository - Interface in ca.bccdcphl.sequencingruns.repositories
 
SequencingInstrumentIlluminaService - Class in ca.bccdcphl.sequencingruns.service
 
SequencingInstrumentIlluminaService() - Constructor for class ca.bccdcphl.sequencingruns.service.SequencingInstrumentIlluminaService
 
SequencingInstrumentNanopore - Class in ca.bccdcphl.sequencingruns.model.aggregates
 
SequencingInstrumentNanopore() - Constructor for class ca.bccdcphl.sequencingruns.model.aggregates.SequencingInstrumentNanopore
 
SequencingInstrumentNanoporeAssembler - Class in ca.bccdcphl.sequencingruns.assembler
 
SequencingInstrumentNanoporeAssembler() - Constructor for class ca.bccdcphl.sequencingruns.assembler.SequencingInstrumentNanoporeAssembler
 
SequencingInstrumentNanoporeDTO - Class in ca.bccdcphl.sequencingruns.dto
 
SequencingInstrumentNanoporeDTO() - Constructor for class ca.bccdcphl.sequencingruns.dto.SequencingInstrumentNanoporeDTO
 
SequencingInstrumentNanoporeRepository - Interface in ca.bccdcphl.sequencingruns.repositories
 
SequencingInstrumentNanoporeService - Class in ca.bccdcphl.sequencingruns.service
 
SequencingInstrumentNanoporeService() - Constructor for class ca.bccdcphl.sequencingruns.service.SequencingInstrumentNanoporeService
 
SequencingInstrumentsController - Class in ca.bccdcphl.sequencingruns.controller
API controller, serves responses for requests to '/instruments'
SequencingInstrumentsController(SequencingInstrumentIlluminaService, SequencingRunIlluminaService, SequencingInstrumentNanoporeService, SequencingRunNanoporeService, SequencingInstrumentIlluminaAssembler, SequencingRunIlluminaAssembler, SequencingInstrumentNanoporeAssembler, SequencingRunNanoporeAssembler) - Constructor for class ca.bccdcphl.sequencingruns.controller.SequencingInstrumentsController
 
SequencingInstrumentStatusUpdateDTO - Class in ca.bccdcphl.sequencingruns.dto
 
SequencingInstrumentStatusUpdateDTO() - Constructor for class ca.bccdcphl.sequencingruns.dto.SequencingInstrumentStatusUpdateDTO
 
SequencingRunIllumina - Class in ca.bccdcphl.sequencingruns.model.aggregates
 
SequencingRunIllumina() - Constructor for class ca.bccdcphl.sequencingruns.model.aggregates.SequencingRunIllumina
 
SequencingRunIlluminaAssembler - Class in ca.bccdcphl.sequencingruns.assembler
 
SequencingRunIlluminaAssembler() - Constructor for class ca.bccdcphl.sequencingruns.assembler.SequencingRunIlluminaAssembler
 
SequencingRunIlluminaDemultiplexing - Class in ca.bccdcphl.sequencingruns.model
 
SequencingRunIlluminaDemultiplexing() - Constructor for class ca.bccdcphl.sequencingruns.model.SequencingRunIlluminaDemultiplexing
 
SequencingRunIlluminaDemultiplexingAssembler - Class in ca.bccdcphl.sequencingruns.assembler
 
SequencingRunIlluminaDemultiplexingAssembler() - Constructor for class ca.bccdcphl.sequencingruns.assembler.SequencingRunIlluminaDemultiplexingAssembler
 
SequencingRunIlluminaDemultiplexingDTO - Class in ca.bccdcphl.sequencingruns.dto
 
SequencingRunIlluminaDemultiplexingDTO() - Constructor for class ca.bccdcphl.sequencingruns.dto.SequencingRunIlluminaDemultiplexingDTO
 
SequencingRunIlluminaDTO - Class in ca.bccdcphl.sequencingruns.dto
 
SequencingRunIlluminaDTO() - Constructor for class ca.bccdcphl.sequencingruns.dto.SequencingRunIlluminaDTO
 
SequencingRunIlluminaRepository - Interface in ca.bccdcphl.sequencingruns.repositories
 
SequencingRunIlluminaRepositoryImpl - Class in ca.bccdcphl.sequencingruns.repositories
 
SequencingRunIlluminaRepositoryImpl(SequencingRunIlluminaRepository) - Constructor for class ca.bccdcphl.sequencingruns.repositories.SequencingRunIlluminaRepositoryImpl
 
SequencingRunIlluminaService - Class in ca.bccdcphl.sequencingruns.service
 
SequencingRunIlluminaService() - Constructor for class ca.bccdcphl.sequencingruns.service.SequencingRunIlluminaService
 
SequencingRunNanopore - Class in ca.bccdcphl.sequencingruns.model.aggregates
 
SequencingRunNanopore() - Constructor for class ca.bccdcphl.sequencingruns.model.aggregates.SequencingRunNanopore
 
SequencingRunNanoporeAssembler - Class in ca.bccdcphl.sequencingruns.assembler
 
SequencingRunNanoporeAssembler() - Constructor for class ca.bccdcphl.sequencingruns.assembler.SequencingRunNanoporeAssembler
 
SequencingRunNanoporeDTO - Class in ca.bccdcphl.sequencingruns.dto
 
SequencingRunNanoporeDTO() - Constructor for class ca.bccdcphl.sequencingruns.dto.SequencingRunNanoporeDTO
 
SequencingRunNanoporeRepository - Interface in ca.bccdcphl.sequencingruns.repositories
 
SequencingRunNanoporeService - Class in ca.bccdcphl.sequencingruns.service
 
SequencingRunNanoporeService() - Constructor for class ca.bccdcphl.sequencingruns.service.SequencingRunNanoporeService
 
SequencingRunsController - Class in ca.bccdcphl.sequencingruns.controller
API controller, serves responses for requests to '/sequencing-runs'
SequencingRunsController(SequencingRunIlluminaService, SequencingRunNanoporeService, SequencingRunIlluminaAssembler, SequencingRunIlluminaDemultiplexingAssembler, SequencingRunNanoporeAssembler, MappingJackson2HttpMessageConverter) - Constructor for class ca.bccdcphl.sequencingruns.controller.SequencingRunsController
 

T

toModel(SequencingInstrumentIllumina) - Method in class ca.bccdcphl.sequencingruns.assembler.SequencingInstrumentIlluminaAssembler
 
toModel(SequencingInstrumentNanopore) - Method in class ca.bccdcphl.sequencingruns.assembler.SequencingInstrumentNanoporeAssembler
 
toModel(SequencingRunIllumina) - Method in class ca.bccdcphl.sequencingruns.assembler.SequencingRunIlluminaAssembler
 
toModel(SequencingRunNanopore) - Method in class ca.bccdcphl.sequencingruns.assembler.SequencingRunNanoporeAssembler
 
toModel(SequencingRunIlluminaDemultiplexing) - Method in class ca.bccdcphl.sequencingruns.assembler.SequencingRunIlluminaDemultiplexingAssembler
 

U

updateStatus(String, String) - Method in class ca.bccdcphl.sequencingruns.service.SequencingInstrumentIlluminaService
 
updateStatus(String, String) - Method in class ca.bccdcphl.sequencingruns.service.SequencingInstrumentNanoporeService
 

W

WebMvcConfig - Class in ca.bccdcphl.sequencingruns.config.api
 
WebMvcConfig() - Constructor for class ca.bccdcphl.sequencingruns.config.api.WebMvcConfig
 
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